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	<front>
		<journal-meta>
			<journal-id journal-id-type="publisher-id">SCIENTIA MARINA</journal-id>
			<journal-title-group>
				<journal-title>Scientia Marina</journal-title>
				<abbrev-journal-title>Sci Mar</abbrev-journal-title>
			</journal-title-group>
			<issn pub-type="epub">0214-8358</issn>
			<publisher>
				<publisher-name>Consejo Superior de Investigaciones Científicas</publisher-name>
			</publisher>
		</journal-meta>
		<article-meta>
			 <article-id pub-id-type="publisher-id">sm4497</article-id>
			 <article-id pub-id-type="doi">10.3989/scimar.04497.25B</article-id>
			 
			
		<title-group>
			  <article-title>Environmental influences on commercial oceanic ommastrephid squids: a stock assessment perspective</article-title>
			<trans-title-group xml:lang="es">
				<trans-title>Influencia de factores ambientales sobre potas oceánicas (Cephalopoda: Ommastrephidae) explotadas comercialmente: un enfoque para la gestión de stocks</trans-title>
			</trans-title-group>
			<alt-title alt-title-type="running-head">Environmental influences on Ommastrephid squid</alt-title>
		</title-group>
		
		<contrib-group>
			 <contrib contrib-type="author" corresp="no"> 
			<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0003-3332-1209</contrib-id>
			<name>
				 <surname> Wang</surname>
				 <given-names>Jintao</given-names>
			</name>
			<xref ref-type="aff" rid="U1"/>
			<xref ref-type="aff" rid="U2"/>
			<ext-link ext-link-type="email" xlink:href="mailto:jtwang@shou.edu.cn">jtwang@shou.edu.cn</ext-link>
		</contrib>
			 <contrib contrib-type="author" corresp="yes"> 
			<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0003-2529-0852</contrib-id>
			<name>
				 <surname>Chen</surname>
				 <given-names>Xinjun</given-names>
			</name>
			<xref ref-type="aff" rid="U1"/>
			<xref ref-type="aff" rid="U3"/>
			<xref ref-type="aff" rid="U4"/>
			<xref ref-type="aff" rid="U5"/>
			<xref ref-type="corresp" rid="cor1"/>
			<ext-link ext-link-type="email" xlink:href="mailto:xjchen@shou.edu.cn">xjchen@shou.edu.cn</ext-link>
		</contrib>
			 <contrib contrib-type="author" corresp="no"> 
			<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-1901-6972</contrib-id>
			<name>
				 <surname>Tanaka</surname>
				 <given-names>Kisei</given-names>
			</name>
			<xref ref-type="aff" rid="U2"/>
			<ext-link ext-link-type="email" xlink:href="mailto:kisei.tanaka@maine.edu">kisei.tanaka@maine.edu</ext-link>
		</contrib>
			 <contrib contrib-type="author" corresp="no"> 
			<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-9291-9182</contrib-id>
			<name>
				 <surname>Cao</surname>
				 <given-names>Jie</given-names>
			</name>
			<xref ref-type="aff" rid="U2"/>
			<ext-link ext-link-type="email" xlink:href="mailto:jie.cao@maine.edu">jie.cao@maine.edu</ext-link>
		</contrib>
			 <contrib contrib-type="author" corresp="no"> 
			<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0003-0655-3864</contrib-id>
			<name>
				 <surname>Chen</surname>
				 <given-names>Yong</given-names>
			</name>
			<xref ref-type="aff" rid="U2"/>
			<xref ref-type="aff" rid="U3"/>
		<ext-link ext-link-type="email" xlink:href="mailto:ychen@maine.edu">ychen@maine.edu</ext-link>
		</contrib>				
			  <aff id="U1">College of Marine Sciences, Shanghai Ocean University, Shanghai 201306, China.</aff>
			  <aff id="U2">School of Marine Sciences, University of Maine, Orono, ME 04469, USA.</aff>
			  <aff id="U3">Collaborative Innovation Centre for Distant-water Fisheries, Shanghai 201306, China.</aff>
			  <aff id="U4">National Engineering Research Centre for Oceanic Fisheries, Shanghai Ocean University, Shanghai 201306, China.</aff>
			  <aff id="U5">Key Laboratory of Sustainable Exploitation of Oceanic Fisheries Resources, Ministry of Education, Shanghai Ocean University, Shanghai 01306, China.</aff>
		 </contrib-group>
		 <contrib-group>
			<contrib contrib-type="editor">
				<name>
					<surname>Guerra</surname>
					<given-names>A.</given-names>
				</name>
				<role>Editor</role>
			</contrib>
		</contrib-group>	 

	 <author-notes>
		<corresp id="cor1">e-mail: <email xlink:href="xjchen@shou.edu.cn">xjchen@shou.edu.cn</email>
		</corresp>
	</author-notes>
		
<pub-date pub-type="epub">
		<day>31</day>
		<month>3</month>
		<year>2017</year>
		</pub-date>
		<pub-date pub-type="collection">
		<year>2017</year>
		</pub-date>
		
		<volume>81</volume>
		<issue>1</issue>
		<fpage>37</fpage>
		<lpage>47</lpage>
		
		<elocation-id content-type="doi">10.3989/scimar.04497.25B</elocation-id>

		 <history>
		  	<date date-type="received">
				<day>27</day>
				<month>6</month>
				<year>2016</year>
			</date>
			<date date-type="accepted">
				<day>4</day>
				<month>11</month>
				<year>2016</year>
			</date>
			<date date-type="published">
				<day>19</day>
				<month>1</month>
				<year>2017</year>
			</date>
		 </history>
		 
		<permissions>
		<copyright-statement>&#x00A9; 2017 CSIC</copyright-statement>
		<copyright-year>2017</copyright-year>
				<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0/">
		<license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-by) Spain 3.0 License.</license-p>
		</license>
		</permissions>
		
		<abstract xml:lang="en">
		<title>SUMMARY</title>
		<p>Ommastrephid squids are short-lived ecological opportunists and their recruitment is largely driven by the surrounding environment. While recent studies suggest that recruitment variability in several squid species can be partially explained by environmental variability derived from synoptic oceanographic data, assessment of ommastrephid stocks using environmental variability is rare. In thisstudy, we modified asurplus production model to incorporate environmental variability into the assessment of threeommastrephid squids (<italic>Ommastrephes bartramii</italic> in the northwest Pacific, <italic>Illex argentinus</italic> in the southwest Atlantic and <italic>Dosidicus gigas</italic> in the southwest Pacific). We assumed that the key environmental variables—suitable sea surface temperature on spawning grounds during the spawning seasons and feeding grounds during the feeding seasons—have effects on the carrying capacity and the instantaneous population growth rate, respectively, in the surplus production model. For each squid stock, the assessment model with environmental variability had the highest fitting accuracy and the lowest mean squared error and coefficient of variation, and the management reference points based on the optimal model were more precautionary. This study advances our understanding of the interactions between the environment and ommastrephid squid population dynamics and can therefore improve the management of these commercially valuable stocks with a short life cycle. </p>
		</abstract>
		<trans-abstract xml:lang="es">
		<title>RESUMEN</title>
		<p>Los miembros de la familia Ommastrephidae (potas) son cefalópodos de vida breve y oportunistas ecológicos, estando sus reclutamientos profundamente influidos por el ambiente circundante. Aunque algunos estudios recientes sugirieron que la variabilidad del reclutamiento en varias especies de esta familia podría explicarse parcialmente por la variabilidad ambiental derivada de datos oceanográficos sinópticos, la gestión de los stocks de omastréfidos empleando factores medioambientales es muy poco frecuente. En el presente trabajo, se ha modificado un modelo de producción generalizada incorporando en él factores ambientales con objeto de ofrecer una herramienta para la gestión y manejo de tres pesquerías: la de <italic>Ommastrephes bartramii</italic> en el Pacífico Noroeste, la <italic>Illex argentinus</italic> en el Atlántico sudoeste y la de <italic>Dosidicus gigas</italic> en el Pacífico sudoeste. Se asumió que los factores ambientales clave: una apropiada temperatura superficial en las áreas de puesta durante las épocas de freza y en las áreas de alimentación durante las estaciones de nutrición, tenían efectos sobre la capacidad de carga y el crecimiento instantáneo de la tasa de crecimiento de la población, respectivamente, en el modelo de producción generalizada. Para el stock de cada especie, el modelo de gestión con las variables ambientales mostró el mayor y más preciso ajuste y el menor error cuadrático y coeficiente de variación; además, los puntos de referencia de manejo basados en el modelo optimizado fueron los más precautorios. El presente estudio significa un avance en nuestro conocimiento sobre las interacciones entre el ambiente y la dinámica de las poblaciones de especies de esta familia de cefalópodos, lo que puede mejorar la gestión de estos stocks de especies de vida breve, cuya importancia comercial es muy grande.</p>
		</trans-abstract>
		<kwd-group xml:lang="en">
			<title>KEYWORDS</title>
			<kwd>Ommastrephid squids</kwd>
			<kwd><italic>Ommastrephes bartramii</italic></kwd>
			<kwd><italic>Illex argentinus</italic></kwd>
			<kwd><italic>Dosidicus gigas</italic></kwd>
			<kwd>stock assessment</kwd>
			<kwd>environmental factors</kwd>			
		</kwd-group>
		<kwd-group xml:lang="es">
			<title>PALABRAS CLAVE</title>
			<kwd>potas (familia Ommastrephidae)</kwd>
			<kwd><italic>Ommastrephes bartramii</italic></kwd>
			<kwd><italic>Illex argentinus</italic></kwd>
			<kwd><italic>Dosidicus gigas</italic></kwd>
			<kwd>gestión de stocks</kwd>
			<kwd>factores medioambientales</kwd>
		</kwd-group>
	 </article-meta>
	</front>
  <body>
<sec id="S1">
<title>INTRODUCTION</title>
			
			<p>Cephalopods are considered to be one of the three major marine fishery resources that are not fully exploited (<xref ref-type="bibr" rid="CIT09">Chen 1996</xref>). Global annual catches of cephalopods have risensteadily over the last fewdecades, with the highest catch being 4.3 million tonnes in 2007 and 4.77 million tonnesin 2014. The annual catches of cephalopods accounted for 3.04-4.75% of the global capture fishery yields (animals) from 1991 to 2012 (<xref ref-type="bibr" rid="CIT16">FAO 2016</xref>).Commercially targeted cephalopods include species of the families Sepiidae, Loliginidae, Ommastrephidae and Octopodidae, with Ommastrephidaehaving the largest proportion (<xref ref-type="bibr" rid="CIT15">Chen et al. 2012</xref>). The Ommastrephidae squid species such as <italic>Todarodes pacificus, Ommastrephes bartramii, Nototodarus sloani, Illex argentinus</italic> and <italic>Dosidicus gigas</italic> are commercially important species. <italic>O. bartramii, I. argentinus</italic> and <italic>D. gigas</italic> are traditionally targeted by the Chinese squid-jigging fleets, and their annual production reached 400000 to 700000 tonnes in 2013 and 2014.</p>
			<p>The neon flying squid <italic>O. bartramii</italic> is widely distributed in the northwest Pacific Ocean (<xref ref-type="bibr" rid="CIT22">Murata 1990</xref>). The Japanese squid-jigging fleet has commercially exploited this species since 1974, and it was later exploited by South Korea, China and Chinese Taipei (<xref ref-type="bibr" rid="CIT37">Wang and Chen 2005</xref>). The <italic>O. bartramii</italic> population is composed of four stocks: the central stock of the autumn cohort, the eastern stock of the autumn cohort, the western stock of the winter-spring cohort and the central-eastern stock of the winter-spring cohort (<xref ref-type="bibr" rid="CIT39">Yatsu 1992</xref>, <xref ref-type="bibr" rid="CIT40">Yatsu et al. 1997</xref>). Of these stocks, the western winter-spring cohort has become an important target in the regions of 150-165°E (<xref ref-type="bibr" rid="CIT14">Chen et al. 2008b</xref>). Since 2000, this stock has mainly been captured by China and Chinese Taipei. The western winter-spring cohort migrates from subtropical waters to the subarctic boundary during the first half of the summer and then moves northward into the sub-Arctic domain in August-November. This species matures gradually in autumn and it seems thatit starts the spawning migration in October and November (<xref ref-type="bibr" rid="CIT23">Murata and Hayase 1993</xref>).</p>
			<p>The spawning and feeding grounds for the western winter-spring cohort of <italic>O. bartramii</italic> are located at 20-30°N, 130-170°E and 38-46°N, 150-165°E (<xref ref-type="bibr" rid="CIT04">Bower 1997</xref>, <xref ref-type="bibr" rid="CIT05">Bower and Ichii 2005</xref>). The suitable sea surface temperature (SST) for the spawners ranges from 21 to 25°C during the spawning season (January-April) (<xref ref-type="bibr" rid="CIT04">Bower 1997</xref>, <xref ref-type="bibr" rid="CIT05">Bower and Ichii 2005</xref>) and favourable SSTs for the feeding ground vary between August and November: 15 to 19°C in August, 14 to 18°C in September, 10 to 13°C in October and 12 to 15°C in November (<xref ref-type="bibr" rid="CIT11">Chen and Tian 2005</xref>).</p>
			<p><italic>Illex argentinus</italic>, the Argentinian shortfin squid, is a major component of commercial squid fisheries in the southwest Atlantic Ocean. <italic>I. argentinus</italic> is widely distributed across the Patagonian Shelf and adjacent oceanic waters between 22 and 54°S (<xref ref-type="bibr" rid="CIT37">Wang and Chen 2005</xref>, <xref ref-type="bibr" rid="CIT14">Chen et al 2008b</xref>).The population structure of I. argentinus is complex and based on length at maturity, area and timing of spawning, and the distribution of early juveniles and adult life stages, divided into four stocks: the South Patagonia Stock (SPS), the Bonaerensis-Northpatagonia Stock, the Summer Spawning Stock and the Southern Brazil Stock (<xref ref-type="bibr" rid="CIT17">Hatanaka 1986</xref>). The Falkland Islands fishery consists almost exclusively of winter spawners and fishery managers assume that it target a single stock (SPS) south of 45°S (<xref ref-type="bibr" rid="CIT06">Brunetti and Ivanovic 1992</xref>). China (<xref ref-type="bibr" rid="CIT19">Lu and Chen 2013</xref>), Chinese Taipei (<xref ref-type="bibr" rid="CIT10">Chen and Chiu 2009</xref>) and the Falkland Islandshave exploited the SPS cohort of <italic>I. argentinus </italic>since 2000 (<xref ref-type="bibr" rid="CIT33">Waluda et al. 1999</xref>).</p>
			<p>Previous studies from this region suggest that the inferred hatching area (the region where winter-hatched <italic>I. argentinus</italic> paralarvae are most commonly found) of SPS is found between 32 and 39°S and 49 and 61°W from June to July (a peak hatching season). <xref ref-type="bibr" rid="CIT34">Waluda et al. (2001a)</xref> found that suitable SST for hatching ranges from 16 to 18°C. The species feeds in the waters from 42 to 54°S and 54 to 62°W from January to June, and the preferred SST for feeding is 7 to 14°C (<xref ref-type="bibr" rid="CIT20">Lu et al. 2013a</xref>).</p>
			<p><italic>Dosidicus gigas</italic>, the jumbo flying squid, supports a major fishery in the eastern Pacific Ocean and its range of distributed extends from 37-40°N to 45-47°S, between California and southern Chile, extending westward from the coast to a maximum of 125-140°W at the equator (<xref ref-type="bibr" rid="CIT25">Nigmatullin et al. 2001</xref>). <italic>D. gigas</italic> fisheries occur off the coast of Peru (<xref ref-type="bibr" rid="CIT29">Taipe et al. 2001</xref>), and Central America (<xref ref-type="bibr" rid="CIT18">Ichii et al. 2002</xref>) and in the Gulf of California, Mexico (<xref ref-type="bibr" rid="CIT24">Nevárez-Martínez et al. 2000</xref>). <italic>D. gigas</italic>’s population structure is not well defined, but based on individual mantle lengths it may include three stocks: large, medium and small sizes (<xref ref-type="bibr" rid="CIT01">Argüelles et al. 2001</xref>). Small-scale fisheries, particularly off Peru, Chile and Mexico, traditionally exploited these stocks (<xref ref-type="bibr" rid="CIT24">Nevárez-Martínez et al. 2000</xref>, <xref ref-type="bibr" rid="CIT27">Rocha and Vega 2003</xref>). However, since the early 1990s there has been an increase in industrial vessels, largely from East Asia (Japan, Korea and China), fishing off Peru and Central America, with a resulting increase in squid catches from the eastern Pacific Ocean (<xref ref-type="bibr" rid="CIT18">Ichii et al. 2002</xref>). The spawning ground of <italic>D. gigas</italic> is defined in the region from 5 to 14°N and 85 to 95°W and the favourable SST for spawning is from 24 to 28°C in September. The feeding ground of <italic>D. gigas</italic> is found from 20°N to 20°S and from 70 to 110°W, based on the distribution of fishing fleets, and the favourable SST is from 17 to 22°C in July (<xref ref-type="bibr" rid="CIT18">Ichii et al. 2002</xref>, <xref ref-type="bibr" rid="CIT32">Waluda and Rodhouse 2006</xref>).</p>
			<p>Recent studies suggest that variations in the oceanographic environmental variables, such as SST, sea surface height (SSH), and chlorophyll <italic>a</italic> (Chl <italic>a</italic>), play an important role in regulating the distribution and abundance of squid populations (<xref ref-type="bibr" rid="CIT35">Waluda et al. 2001b</xref>, <xref ref-type="bibr" rid="CIT36">2006</xref>, <xref ref-type="bibr" rid="CIT12">Chen et al. 2007</xref>). Here we focus on SST influencing abundances of ommastrephid squid. For example, <xref ref-type="bibr" rid="CIT12">Chen et al. (2007)</xref> found that the SST rose by 1°C in a La Niña year compared with the normal level, and a higher SST resulted in unfavourable recruitment conditions for <italic>O. bartramii</italic>. In an El Niño year, however, the SST was almost the same as in a normal year; thereby leading to favourable conditions for recruitment. SST data analyses for <italic>I. argentinus</italic> showed that variations in the availability of optimum sea temperature for larval development during the spawning season explained about 55% of the recruitment variability (<xref ref-type="bibr" rid="CIT34">Waluda et al. 2001a</xref>). Moreover, <italic>D. giga</italic>s abundance was strongly influenced by the mesoscale variability linked to the ENSO, with low levels of upwelling during the very strong El Niño leading to low catches of <italic>D. gigas</italic> off Peru (<xref ref-type="bibr" rid="CIT36">Waluda et al. 2006</xref>).</p>
			<p>The majority of ommastrephid squid, such as <italic>O. bartramii, I. argentinus</italic> and <italic>D. gigas</italic>, are short-lived species with about aone-year life span, and the biomass of these species in the subsequent year is largely composed of new recruits. As the annual recruitment variability of ommastrephid squid is largely driven by the environment, there is a growing need to incorporate environmental variability in the assessment of ommastrephid stocks. However, to date few studies of ommastrephid stock assessment have included environmental factors.</p>
		  <p>In this study, we modified a surplus production model by incorporating known environmental factors of spawning and feeding grounds, and then used this model to evaluate the environmental influence on the populations of <italic>O. bartramii, I. argentinus</italic> and <italic>D. gigas</italic>. This study shows the importance of including environmental variables in the assessment of squid populationdynamics.</p>
			
			</sec>
<sec id="S2">
<title>MATERIALS AND METHODS</title>
			
<sec id="S2.1">
<title>Fishery data</title>
			
		  <p>Daily catch (tonnes, t), effort (days fished, d), fishing dates and fishing locations (longitude and latitude) were obtained from the Chinese commercial jigging fleets operating in the northwest Pacific Ocean, the southeast Pacific Ocean and the southwest Atlantic Ocean. <xref ref-type="table" rid="T1">Table 1</xref> lists the spatial and temporal ranges ofommastrephid squid-jigging fishery. The spatial scale used for aggregating the fishery data is 0.5° latitude by 0.5° longitude.</p>
		  	<table-wrap id="T1">
			<label>Table 1</label>
		<caption>
			<title>The spatial and temporal range of Chinese squid-jigging fishery for <italic>O. bartramii</italic> in the Northwest Pacific, <italic>I. argentinus</italic> in the Southwest Atlantic and <italic>D. gigas</italic> in the southeast Pacific.</title>
		</caption>
		<table frame="hsides" rules="groups">
  <thead>
		        <tr>
		          <th>Stock</th>
		          <th> operating time
		            
	              </th>
		          <th>ranges of fishing grounds</th>
	            </tr>
	          </thead>
		      <tbody>
		        <tr>
		          <td><italic>O. bartramii</italic>
		            </td>
		          <td>from June to November in 2003-2013</td>
		          <td> 35-45°N, 140-165°E
		            </td>
	            </tr>
		        <tr>
		          <td><italic>I. argentines</italic>
		            </td>
		          <td>from January to June in 2000-2010</td>
		          <td> 30-45°S, 40-65°W
		            </td>
	            </tr>
		        <tr>
		          <td><italic>D. gigas</italic>
		            </td>
		          <td>from January to December in 2003-2012</td>
		          <td> 8-18°S, 70-95°W
		            </td>
	            </tr>
	          </tbody>
	        </table>
	      </table-wrap>
<p>There is virtually no by-catch in the squid-jigging fishery (<xref ref-type="bibr" rid="CIT37">Wang and Chen 2005</xref>). All the Chinese jigging vessels in a given fishing area areequipped with the same type of jiggers, and had identical fishing power and operational behaviour. Meanwhile, Chinese jigging vessels operated the same number of jigging machines; the fishing effort extracted from different vessels is consistent (<xref ref-type="bibr" rid="CIT37">Wang and Chen 2005</xref>). Therefore, we consider catch per unit effort (CPUE, t/d) of the squid-jigging vessels as a reliable indicator of stock abundance on the fishing grounds (<xref ref-type="bibr" rid="CIT13">Chen et al. 2008a</xref>). The formula for calculating monthly nominal CPUE in one fishing unit of 0.5×0.5° was</p>
		<table-wrap>
		<table frame="hsides" rules="groups">
			  <tr>
			    <td width="95%"><p align="center"><math display='block'>
 <mrow>
  <msub>
   <mrow>
    <mtext>CPUE</mtext></mrow>
   <mrow>
    <mi>y</mi><mo>,</mo><mi>m</mi><mo>,</mo><mi>i</mi></mrow>
  </msub>
  <mo>=</mo><mfrac>
   <mrow>
    <msub>
     <mtext>C</mtext>
     <mrow>
      <mi>y</mi><mo>,</mo><mi>m</mi><mo>,</mo><mi>i</mi></mrow>
    </msub>
    </mrow>
   <mrow>
    <msub>
     <mtext>E</mtext>
     <mrow>
      <mi>y</mi><mo>,</mo><mi>m</mi><mo>,</mo><mi>i</mi></mrow>
    </msub>
    </mrow>
  </mfrac>
  </mrow>
</math></p>
</td>
			    <td width="5%">(1)</td>
		      </tr>
		  </table></table-wrap>
		  <p>where CPUE<sub>y,m,i</sub> is the monthly CPUE at <italic>i</italic> fishing unit in month <italic>m</italic> and year y; C<sub>y,m,i</sub> is the monthly catch (t) at <italic>i</italic> fishing unit in month <italic>m</italic> and year <italic>y</italic>; and <italic>E</italic><sub>y,m,I</sub> is the number of fishing days at <italic>i</italic> fishing unit in month <italic>m</italic> and year <italic>y</italic>.</p>
			<p>Annual <italic>O. bartramii</italic> catches by China accounted for approximately 80% of the total catches of this species (<xref ref-type="bibr" rid="CIT37">Wang and Chen 2005</xref>). Therefore, we extrapolated Chinese catch (divided by 80%) to estimate the total annual catch of <italic>O. bartramii</italic> from 2003 to 2013 in the northwest Pacific. The annual catch of <italic>I. argentinus </italic>was obtained from mainland China and Chinese Taipei, which landed almost all the catch from the SPS cohort in the Falkland Island Interim Conservation Zone, and from the Falkland Islands, which landed almost all the catch in the Exclusive Economic Zone. The Food and Agriculture Organization (FAO) provided annual catches of <italic>D. gigas</italic> (<xref ref-type="fig" rid="F1">Fig. 1</xref>).</p>
						<fig id="F1">
				<label>Fig. 1</label>
				<caption>
				<title>Annual catch for <italic>O. bartramii</italic> in the northwest Pacific, <italic>I. argentinus</italic> in Southwest Atlantic and <italic>D. gigas</italic> in the southeast Pacific.</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig1_fmt.jpeg"/>
			</fig>

</sec>
<sec id="S2.2">
<title>Environmental data</title>
			
			<p>The favourable SSTs on the spawning and feeding grounds for three species are shown in <xref ref-type="table" rid="T2">Table 2</xref>. Monthly global SST, SSH, and Chl <italic>a</italic> concentration data from 2000 to 2013 were downloaded from the Live Access Server of the National Oceanic and Atmospheric Administration OceanWatch (<ext-link ext-link-type="uri" xlink:href="http://Oceanwatch.pifsc.noaa.gov/las/servlets/data">http://Oceanwatch.pifsc.noaa.gov/las/servlets/data</ext-link>). The spatial resolution of SST, SSH and Chl <italic>a</italic> concentration data were 0.1×0.1°, 0.25×0.25° and 0.05×0.05°, respectively. All the environmental data were then converted to a 0.5×0.5° grid for each month in order to correspond to the spatial grid of CPUE.</p>
				<table-wrap id="T2">
			<label>Table 2</label>
		<caption>
			<title>The favourable SSTs on the spawning and feeding grounds for <italic>O. bartrami</italic>i in the northwest Pacific, <italic>I. argentinus</italic> in the southwest Atlantic and <italic>D. gigas</italic> in the southeast Pacific.</title>
		</caption>
		<table frame="hsides" rules="groups">
  <thead>
			      <tr>
			        <th rowspan="2">Squids</th>
			        <th colspan="2">spawning ground</th>
			        <th colspan="2">feeding grounds</th>
		          </tr>
			      <tr>
			        <th>ranges</th>
			        <th>favourable SST</th>
			        <th>ranges</th>
			        <th>favourable SST</th>
		          </tr>
		        </thead>
			    <tbody>
			      <tr class="Row-Column-19">
			        <td><italic>O. bartramii</italic></td>
			        <td>20-30°N, 130-170°E</td>
			        <td> 21-25°C from January to May
			          </td>
			        <td>38-46°N, 150-165°E</td>
			        <td> 15-19°C in August
			          
			          14-18°C in September
			          
			          10-13°C in October
			          
			          12-15°C in November
		            </td>
		          </tr>
			      <tr>
			        <td><italic>I. argentinus</italic></td>
			        <td>32-39°S, 49-61°W</td>
			        <td>16-18°C from June to August</td>
			        <td> 39-51°S 57-67°W
			          </td>
			        <td> 7-14°C from January to May
			          </td>
		          </tr>
			      <tr>
			        <td><italic>D. gigas</italic></td>
			        <td> 5-14°N, 85-95°W
			          </td>
			        <td> 24º-28°C in September
			          </td>
			        <td> 20°N-20°S, 110-70°W
			          </td>
			        <td>17-22°C in July</td>
		          </tr>
		        </tbody>
		      </table>
			  </table-wrap>
</sec>
<sec id="S2.3">
<title>Standardizing yearly CPUE by the generalized additive model</title>
			
			<p>Many environmental factors such as SST, SSH and Chl <italic>a</italic> determine the distribution of squid populations (<xref ref-type="bibr" rid="CIT30">Tian et al. 2009a</xref>), and those factors are used to forecast the fishing grounds for squids. To remove possible effects of environmental factors in fishing processes, we standardized nominal CPUE. In a similar approach, a generalized additive model (GAM)was used to standardize yearly CPUE of ommastrephid squids by <xref ref-type="bibr" rid="CIT38">Wang et al. (2015)</xref> and discussed in <xref ref-type="bibr" rid="CIT31">Tian et al. (2009b)</xref> based on the data of Chinese commercial jigging fleets. The GAM used for CPUE standardization was</p>
			<table-wrap>
		<table frame="hsides" rules="groups">
			  <tr>
			    <td width="95%">Ln(CPUE+c) = <italic>factor</italic>(year)+<italic>factor</italic>(month)+<italic>s</italic>(longitude)+<italic>s</italic>(latitude)+<italic>s</italic>(SST)+<italic>s</italic>(SSH)+<italic>s</italic>(Chl-<italic>a</italic>)+ ε</td>
			    <td width="5%">(2)</td>
		      </tr>
		  </table>
			</table-wrap>
			<p>where <italic>s</italic> is a spline smoother function; and constant c is fixed 10% of mean CPUE (<xref ref-type="bibr" rid="CIT08">Campbell 2004</xref>); Var ε=σ<sup>2</sup> and E(ε)=0.</p>
			
			</sec>
<sec id="S2.4">
<title>Stock assessment for ommastrephid squid</title>
<sec id="S2.4.1">
<title>Development of environmentally dependent surplus production models</title>
			
		  <p><xref ref-type="bibr" rid="CIT02">Bakun and Csirke (1998)</xref> suggested that environmental factors tended to be more important than factors such as predators and diseasein influencing the dynamics of squid recruitment. Therefore, we assumed that suitable SSTs in the presumed spawning grounds during the spawning seasons (referred to as <italic>Ps</italic>) and presumed feeding grounds during the feeding seasons (referred to as <italic>Pf</italic>) have effects on parameters <italic>K</italic> and <italic>r</italic> in surplus production models, respectively. </p>
			<p>The following four surplus production models were proposed:</p>
			<table-wrap>
		<table frame="hsides" rules="groups">
			  <tr>
			    <td width="95%"><p align="center"><math display='block'>
 <mtable>
  <mtr>
   <mtd>
    <mi>log</mi><mrow><mo>(</mo>
     <mrow>
      <msub>
       <mi>B</mi>
       <mrow>
        <mi>t</mi><mo>=</mo><mn>1</mn></mrow>
      </msub>
      </mrow>
    <mo>)</mo></mrow><mrow><mo>|</mo><mrow>
     <mi>K</mi><mo>,</mo><msup>
      <mi>&#x03C3;</mi>
      <mn>2</mn>
     </msup>
     <mo>=</mo><mi>log</mi><mo stretchy='false'>(</mo><mi>K</mi><mo stretchy='false'>)</mo><mo>+</mo><msub>
      <mi>u</mi>
      <mi>t</mi>
     </msub>
     </mrow></mrow>
   </mtd>
  </mtr>
  <mtr>
   <mtd>
    <mi>log</mi><mo stretchy='false'>(</mo><msub>
     <mi>B</mi>
     <mi>t</mi>
    </msub>
    <mo stretchy='false'>)</mo><mrow><mo>|</mo><mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>,</mo><mi>K</mi><mo>,</mo><mi>r</mi><mo>,</mo></mrow></mrow><msup>
     <mi>&#x03C3;</mi>
     <mn>2</mn>
    </msup>
    <mo>=</mo><mi>log</mi><mrow><mo>{</mo> <mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>+</mo><mi>r</mi><msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mrow><mo>(</mo>
      <mrow>
       <mn>1</mn><mo>&#x2212;</mo><mfrac>
        <mrow>
         <msub>
          <mi>B</mi>
          <mrow>
           <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
         </msub>
         </mrow>
        <mi>K</mi>
       </mfrac>
       </mrow>
     <mo>)</mo></mrow><mo>&#x2212;</mo><msub>
      <mi>C</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     </mrow> <mo>}</mo></mrow><mo>+</mo><msub>
     <mi>u</mi>
     <mi>t</mi>
    </msub>
    
   </mtd>
  </mtr>
 </mtable>
 
</math></p>
</td>
			    <td width="5%">(3)</td>
		      </tr>
		  </table>
		  </table-wrap>
		  <table-wrap>
		<table frame="hsides" rules="groups">
              <tr>
                <td width="95%"><p align="center"><math display='block'>
 <mtable>
  <mtr>
   <mtd>
    <mi>log</mi><mrow><mo>(</mo>
     <mrow>
      <msub>
       <mi>B</mi>
       <mrow>
        <mi>t</mi><mo>=</mo><mn>1</mn></mrow>
      </msub>
      </mrow>
    <mo>)</mo></mrow><mrow><mo>|</mo><mrow>
     <mi>K</mi><mo>,</mo><msup>
      <mi>&#x03C3;</mi>
      <mn>2</mn>
     </msup>
     <mo>=</mo><mi>log</mi><mo stretchy='false'>(</mo><mi>K</mi><mo stretchy='false'>)</mo><mo>+</mo><msub>
      <mi>u</mi>
      <mi>t</mi>
     </msub>
     </mrow></mrow>
   </mtd>
  </mtr>
  <mtr>
   <mtd>
    <mi>log</mi><mo stretchy='false'>(</mo><msub>
     <mi>B</mi>
     <mi>t</mi>
    </msub>
    <mo stretchy='false'>)</mo><mrow><mo>|</mo><mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>,</mo><mi>K</mi><mo>,</mo><mi>r</mi><mo>,</mo></mrow></mrow><msup>
     <mi>&#x03C3;</mi>
     <mn>2</mn>
    </msup>
    <mo>=</mo><mi>log</mi><mrow><mo>{</mo> <mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>+</mo><mi>r</mi><msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mrow><mo>(</mo>
      <mrow>
       <mn>1</mn><mo>&#x2212;</mo><mfrac>
        <mrow>
         <msub>
          <mi>B</mi>
          <mrow>
           <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
         </msub>
         </mrow>
        <mrow>
         <mi>P</mi><msub>
          <mi>s</mi>
          <mrow>
           <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
         </msub>
         <mi>K</mi></mrow>
       </mfrac>
       </mrow>
     <mo>)</mo></mrow><mo>&#x2212;</mo><msub>
      <mi>C</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     </mrow> <mo>}</mo></mrow><mo>+</mo><msub>
     <mi>u</mi>
     <mi>t</mi>
    </msub>
    
   </mtd>
  </mtr>
 </mtable>
 
</math>
</p></td>
                <td width="5%">(4)</td>
              </tr>
          </table>
		  </table-wrap>
		  <table-wrap>
		<table frame="hsides" rules="groups">
            <tr>
              <td width="95%"><p align="center"><math display='block'>
 <mtable>
  <mtr>
   <mtd>
    <mi>log</mi><mrow><mo>(</mo>
     <mrow>
      <msub>
       <mi>B</mi>
       <mrow>
        <mi>t</mi><mo>=</mo><mn>1</mn></mrow>
      </msub>
      </mrow>
    <mo>)</mo></mrow><mrow><mo>|</mo><mrow>
     <mi>K</mi><mo>,</mo><msup>
      <mi>&#x03C3;</mi>
      <mn>2</mn>
     </msup>
     <mo>=</mo><mi>log</mi><mo stretchy='false'>(</mo><mi>K</mi><mo stretchy='false'>)</mo><mo>+</mo><msub>
      <mi>u</mi>
      <mi>t</mi>
     </msub>
     </mrow></mrow>
   </mtd>
  </mtr>
  <mtr>
   <mtd>
    <mi>log</mi><mo stretchy='false'>(</mo><msub>
     <mi>B</mi>
     <mi>t</mi>
    </msub>
    <mo stretchy='false'>)</mo><mrow><mo>|</mo><mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>,</mo><mi>K</mi><mo>,</mo><mi>r</mi><mo>,</mo></mrow></mrow><msup>
     <mi>&#x03C3;</mi>
     <mn>2</mn>
    </msup>
    <mo>=</mo><mi>log</mi><mrow><mo>{</mo> <mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>+</mo><mi>P</mi><msub>
      <mi>f</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mi>r</mi><msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mrow><mo>(</mo>
      <mrow>
       <mn>1</mn><mo>&#x2212;</mo><mfrac>
        <mrow>
         <msub>
          <mi>B</mi>
          <mrow>
           <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
         </msub>
         </mrow>
        <mi>K</mi>
       </mfrac>
       </mrow>
     <mo>)</mo></mrow><mo>&#x2212;</mo><msub>
      <mi>C</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     </mrow> <mo>}</mo></mrow><mo>+</mo><msub>
     <mi>u</mi>
     <mi>t</mi>
    </msub>
    
   </mtd>
  </mtr>
 </mtable>
 
</math>
</p></td>
              <td width="5%">(5)</td>
            </tr>
          </table>
		  </table-wrap>
		  <table-wrap>
		<table frame="hsides" rules="groups">
            <tr>
              <td width="95%"><p align="center"><math display='block'>
 <mtable>
  <mtr>
   <mtd>
    <mi>log</mi><mrow><mo>(</mo>
     <mrow>
      <msub>
       <mi>B</mi>
       <mrow>
        <mi>t</mi><mo>=</mo><mn>1</mn></mrow>
      </msub>
      </mrow>
    <mo>)</mo></mrow><mrow><mo>|</mo><mrow>
     <mi>K</mi><mo>,</mo><msup>
      <mi>&#x03C3;</mi>
      <mn>2</mn>
     </msup>
     <mo>=</mo><mi>log</mi><mo stretchy='false'>(</mo><mi>K</mi><mo stretchy='false'>)</mo><mo>+</mo><msub>
      <mi>u</mi>
      <mi>t</mi>
     </msub>
     </mrow></mrow>
   </mtd>
  </mtr>
  <mtr>
   <mtd>
    <mi>log</mi><mo stretchy='false'>(</mo><msub>
     <mi>B</mi>
     <mi>t</mi>
    </msub>
    <mo stretchy='false'>)</mo><mrow><mo>|</mo><mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>,</mo><mi>K</mi><mo>,</mo><mi>r</mi><mo>,</mo></mrow></mrow><msup>
     <mi>&#x03C3;</mi>
     <mn>2</mn>
    </msup>
    <mo>=</mo><mi>log</mi><mrow><mo>{</mo> <mrow>
     <msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mo>+</mo><mi>P</mi><msub>
      <mi>f</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mi>r</mi><msub>
      <mi>B</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     <mrow><mo>(</mo>
      <mrow>
       <mn>1</mn><mo>&#x2212;</mo><mfrac>
        <mrow>
         <msub>
          <mi>B</mi>
          <mrow>
           <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
         </msub>
         </mrow>
        <mrow>
         <mi>P</mi><msub>
          <mi>s</mi>
          <mrow>
           <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
         </msub>
         <mi>K</mi></mrow>
       </mfrac>
       </mrow>
     <mo>)</mo></mrow><mo>&#x2212;</mo><msub>
      <mi>C</mi>
      <mrow>
       <mi>t</mi><mo>&#x2212;</mo><mn>1</mn></mrow>
     </msub>
     </mrow> <mo>}</mo></mrow><mo>+</mo><msub>
     <mi>u</mi>
     <mi>t</mi>
    </msub>
    
   </mtd>
  </mtr>
 </mtable>
 
</math>
</p></td>
              <td width="5%">(6)</td>
            </tr>
          </table>
		  </table-wrap>
          <p>where <italic>B</italic><sub>t</sub> is the biomass in <italic>t</italic> year;<italic> K</italic> is the carrying capacity; <italic>r</italic> is the intrinsic rate of stock growth; <italic>u</italic><sub>t</sub> is independent and identically distributed IID N(0, τ<sup>2</sup>); and <italic>Ps</italic><sub>t</sub> and <italic>Pf</italic><sub>t</sub>, are annual environmental indices for <italic>K</italic> and <italic>r</italic>, which are the averages of monthly <italic>Ps</italic> and <italic>Pf</italic> in year t, calculated as the number of fishing spatial grids with optimal SST divided by the total number of the fishing grids on the spawning and feeding grounds. Equation (3) is the original Schaefer surplus production model (referred to as SP). Equation (4) is the surplus production model with added <italic>Ps</italic> effect (referred to as Ps-EDSP). Equation (5) is the surplus production model with added <italic>Pf</italic> effect (referred to as Pf-EDSP). Finally, Equation (6) is the surplus production model with the consideration of <italic>Ps</italic> and <italic>Pf</italic> effects (referred to as Ps-Pf-EDSP). The standardized CPUE, <italic>I</italic><sub>t</sub>, is assumed to be proportional to <italic>B</italic><sub>t</sub>. This assumption can be written as </p>
		<table-wrap>
		<table frame="hsides" rules="groups">
			  <tr>
			    <td width="95%"><p align="center"><math display='block'>
 <mrow>
  <mi>log</mi><mo stretchy='false'>(</mo><msub>
   <mi>I</mi>
   <mi>t</mi>
  </msub>
  <mo stretchy='false'>)</mo><mrow><mo>|</mo><mrow>
   <msub>
    <mi>B</mi>
    <mi>t</mi>
   </msub>
   <mo>,</mo><mi>q</mi><mo>,</mo><msup>
    <mi>&#x03C4;</mi>
    <mn>2</mn>
   </msup>
   <mo>=</mo><mi>log</mi><mo stretchy='false'>(</mo><mi>q</mi><mo stretchy='false'>)</mo><mo>+</mo><mi>log</mi><mo stretchy='false'>(</mo><msub>
    <mi>B</mi>
    <mi>t</mi>
   </msub>
   <mo stretchy='false'>)</mo><mo>&#x2212;</mo><msub>
    <mi>v</mi>
    <mi>t</mi>
   </msub>
   </mrow></mrow></mrow>
</math>
</p></td>
			    <td width="5%">(7)</td>
		      </tr>
		  </table>
		  </table-wrap>
		  <p>where <italic>q</italic> is the catchability coefficient and <italic>v</italic><sub>t</sub> is independent and identically distributed IID N(0, τ<sup>2</sup>).</p>
			
		  </sec>
<sec id="S2.4.2">
<title>Parameter estimation</title>
			
			<p>To fit the models to observed data for estimating model parameters, we used the maximum likelihood (ML) method. A likelihood function was used to calculate the goodness of fit between the observed data and the predicted values. We assumed that the observational errors followed the log-normal distribution, and the likelihood function was written as</p>
			<table-wrap>
		<table frame="hsides" rules="groups">
			  <tr>
			    <td width="95%"><p align="center"><math display='block'>
 <mtable>
  <mtr>
   <mtd>
    <mi>L</mi><mrow><mo>(</mo>
     <mrow>
      <mi>q</mi><mo>,</mo><msup>
       <mi>&#x03C4;</mi>
       <mn>2</mn>
      </msup>
      <mo>,</mo><msup>
       <mi>&#x03C3;</mi>
       <mn>2</mn>
      </msup>
      <mo>,</mo><mi>r</mi><mo>,</mo><mi>K</mi><mrow><mo>|</mo><mrow>
       <msub>
        <mi>I</mi>
        <mi>t</mi>
       </msub>
       </mrow></mrow></mrow>
    <mo>)</mo></mrow><mo>=</mo>
   </mtd>
  </mtr>
  <mtr>
   <mtd>
    <mo>=</mo><mstyle displaystyle='true'>
     <mo>&#x220F;</mo> <mrow>
      <mfrac>
       <mn>1</mn>
       <mrow>
        <msqrt>
         <mrow>
          <mn>2</mn><mi>&#x03C0;</mi><msup>
           <mi>&#x03C4;</mi>
           <mn>2</mn>
          </msup>
          <msub>
           <mi>I</mi>
           <mi>t</mi>
          </msub>
          </mrow>
        </msqrt>
        </mrow>
      </mfrac>
      </mrow>
    </mstyle><mi>exp</mi><mrow><mo>{</mo> <mrow>
     <mfrac>
      <mrow>
       <mo>&#x2212;</mo><msup>
        <mrow>
         <mrow><mo>[</mo> <mrow>
          <mi>log</mi><mo stretchy='false'>(</mo><msub>
           <mi>I</mi>
           <mi>t</mi>
          </msub>
          <mo stretchy='false'>)</mo><mo>&#x2212;</mo><mi>log</mi><mo stretchy='false'>(</mo><mi>q</mi><msub>
           <mi>B</mi>
           <mi>t</mi>
          </msub>
          <mo stretchy='false'>)</mo></mrow> <mo>]</mo></mrow></mrow>
        <mn>2</mn>
       </msup>
       </mrow>
      <mn>2</mn>
     </mfrac>
     </mrow> <mo>}</mo></mrow>
   </mtd>
  </mtr>
 </mtable>
 
</math>
</p></td>
			    <td width="5%">(8)</td>
		      </tr>
		  </table>
		  </table-wrap>
		  <p>To estimate uncertainties for model parameters, we developed an algorithm that incorporates a bootstrap approach into the ML. The following steps describe this bootstrap-based ML method:</p>
			<blockquote>
			  <p>- estimate the model parameters using the ML method;<br />
			    - calculate the predicted CPUEs using the ML-estimated parameters;<br />
			    - calculate the residuals between observed and predicted log CPUEs;<br />
			    - randomly sample the residuals with replacement to add to the predicted logarithm CPUEs to yield pseudo-observed CPUEs;<br />
			    - apply the ML method to the pseudo-observed CPUEs to estimate bootstrapped estimates;<br />
			    - repeat steps 4 to 5 1500 times to simulate 1500 sets of pseudo-CPUE data and to subsequently estimate the corresponding 1500 sets of bootstrapped parameters; and<br />
			    - calculate the mean value and 95% confidence intervals for each parameter using the 1500 bootstrapped estimates.</p>
		  </blockquote>
<p>The meanvalues and 95% confidence intervals derived from the 1500 sets of bootstrapped parameters were used as parameter estimates and their associated uncertainties. The choice of 1500 bootstrap runs was made because stable estimates of uncertainly could be achieved when it reached 1500 runs. The best model for each species was selected based on the Akaike information criterion (AIC) of models and the CVs of the estimated parameters.</p>
</sec>
<sec id="S2.4.3">
<title>Biological reference points</title>
			
		  <p>Biological reference pointswere estimated, including maximum sustainable yield (MSY), fishing mortality at MSY level (F<sub>MSY</sub>), and biomass at MSY level (B<sub>MSY</sub>). F<sub>0.1</sub> and B<sub>MSY</sub> were used as the target reference points, and F<sub>MSY</sub> and 25% of B<sub>MSY</sub> were used as limit reference points (i.e. F<sub>lim</sub> and B<sub>lim</sub>) in our proposed management system (<xref ref-type="bibr" rid="CIT38">Wang et al. 2015</xref>).</p>
			
			</sec></sec></sec>
<sec id="S3">
<title>RESULTS</title>
			
<sec id="S3.1">
<title>GAM-standardized CPUEs for ommastrephid squids</title>
			
			<p>All the covariates (year, month, longitude, latitude, SST, SSH and Chl <italic>a</italic>) were statistically significant in a preliminary analysis, with no interaction terms being considered. The comparison of GAM-standardized CPUEs and nominal CPUEs showed temporal fluctuation in the species abundance (<xref ref-type="fig" rid="F2">Fig. 2</xref>). For <italic>O. bartramii</italic>, the major difference was observed in 2007, with the highest nominal CPUE and lowest GAM-standardized CPUEs. For <italic>I. argentinus</italic>, the trend of GAM-standardized CPUEs was more stable than the trend of nominal CPUEs. The lowest and highest GAM-standardized CPUEs were observed in 2006 and 2009, respectively. A similar trend between nominal CPUEs and GAM-standardized CPUEs was observed for <italic>D. gigas</italic>. The highest CPUE was observed in 2004 and the lowest CPUE was observed in 2007.</p>
						<fig id="F2">
				<label>Fig. 2</label>
				<caption>
				<title>Nominal and GAM-standardized CPUEs for <italic>O. bartramii </italic>in the northwest Pacific in 2003-2013, <italic>I. argentinus</italic> in southwest Atlantic in 2000-2010 and <italic>D. gigas</italic> in the southeast Pacific in 2003-2012 based on Chinese commercial jigging fleets.</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig2_fmt.jpeg"/>
			</fig>

</sec>
<sec id="S3.2">
<title>Comparison of surplus production models for ommastrephid squid</title>
			
			<p><xref ref-type="table" rid="T3">Table 3</xref> shows <italic>Ps</italic> and <italic>Pf</italic> values for ommastrephid squid. The model incorporating environmental factors was the best one (<xref ref-type="table" rid="T4">Tables 4</xref>, <xref ref-type="table" rid="T5">5</xref>, <xref ref-type="table" rid="T6">6</xref>). For <italic>O. bartramii</italic>, the smallest mean square error (MSE), CV and AIC were 0.43, 29% and 27.47 respectively for the Ps-EDSP model, and therefore the Ps-EDSP was chosen as the best model for <italic>O. bartramii</italic> (<xref ref-type="table" rid="T4">Table 4</xref>). Means of <italic>r</italic>, <italic>K</italic> and <italic>q</italic> estimated with the bootstrapped ML method were 0.443, 125×10<sup>4</sup> t and 0.027×10<sup>–4</sup>, respectively (<xref ref-type="table" rid="T4">Table 4</xref>). The distributions of all three parameters were positively skewed (<xref ref-type="fig" rid="F3">Fig. 3</xref>). The estimated MSY ranged from 10×10<sup>4</sup> to 45×10<sup>4</sup>, with a mean value of 14×10<sup>4</sup> t (<xref ref-type="fig" rid="F3">Fig. 3</xref>).</p>
				<table-wrap id="T3">
			<label>Table 3</label>
		<caption>
			<title>Time series indices of Ps and Pf for <italic>O. bartramii</italic>, <italic>I. argentinus </italic>and <italic>D. gigas</italic>.</title>
		</caption>
		<table frame="hsides" rules="groups">
  <thead>
			      <tr>
			        <th rowspan="2">Year</th>
			        <th colspan="2"> <italic>O. bartramii</italic> </th>
			        <th colspan="2"> <italic>I. argentinus</italic> </th>
			        <th colspan="2"> <italic>D. gigas</italic> </th>
		          </tr>
			      <tr>
			        <th> <italic>Ps</italic> </th>
			        <th> <italic>Pf</italic> </th>
			        <th> <italic>Ps</italic> </th>
			        <th> <italic>Pf</italic> </th>
			        <th> <italic>Ps</italic> </th>
			        <th> <italic>Pf</italic> </th>
		          </tr>
		        </thead>
			    <tbody>
			      <tr>
			        <td>2000</td>
			        <td></td>
			        <td></td>
			        <td>0.95</td>
			        <td> 0.79 </td>
			        <td></td>
			        <td></td>
		          </tr>
			      <tr>
			        <td>2001</td>
			        <td></td>
			        <td></td>
			        <td>0.51</td>
			        <td> 1 </td>
			        <td></td>
			        <td></td>
		          </tr>
			      <tr>
			        <td>2002</td>
			        <td></td>
			        <td></td>
			        <td>0.62</td>
			        <td> 0.80 </td>
			        <td></td>
			        <td></td>
		          </tr>
			      <tr>
			        <td>2003</td>
			        <td>0.89</td>
			        <td>1</td>
			        <td>0.98</td>
			        <td>0.93</td>
			        <td>0.98</td>
			        <td> 0.67 </td>
		          </tr>
			      <tr>
			        <td>2004</td>
			        <td>0.94</td>
			        <td>0.89</td>
			        <td>0.64</td>
			        <td>0.73</td>
			        <td>0.64</td>
			        <td> 0.86 </td>
		          </tr>
			      <tr>
			        <td>2005</td>
			        <td>0.96</td>
			        <td>0.71</td>
			        <td>1</td>
			        <td>0.82</td>
			        <td>0.76</td>
			        <td> 0.70 </td>
		          </tr>
			      <tr>
			        <td>2006</td>
			        <td>0.86</td>
			        <td>0.97</td>
			        <td>0.62</td>
			        <td>0.92</td>
			        <td>0.81</td>
			        <td> 0.61 </td>
		          </tr>
			      <tr>
			        <td>2007</td>
			        <td>0.88</td>
			        <td>0.84</td>
			        <td>0.67</td>
			        <td>0.89</td>
			        <td>0.64</td>
			        <td> 0.81 </td>
		          </tr>
			      <tr>
			        <td>2008</td>
			        <td>0.8</td>
			        <td>0.72</td>
			        <td>0.85</td>
			        <td>0.82</td>
			        <td>0.88</td>
			        <td> 0.52 </td>
		          </tr>
			      <tr>
			        <td>2009</td>
			        <td>0.89</td>
			        <td>0.88</td>
			        <td>0.93</td>
			        <td>0.79</td>
			        <td>0.71</td>
			        <td> 0.51 </td>
		          </tr>
			      <tr>
			        <td>2010</td>
			        <td>1</td>
			        <td>0.76</td>
			        <td>0.90</td>
			        <td>0.97</td>
			        <td>0.65</td>
			        <td> 1 </td>
		          </tr>
			      <tr>
			        <td>2011</td>
			        <td>0.96</td>
			        <td> 0.66 </td>
			        <td></td>
			        <td></td>
			        <td>1</td>
			        <td> 0.68 </td>
		          </tr>
			      <tr>
			        <td>2012</td>
			        <td>0.86</td>
			        <td> 0.67 </td>
			        <td></td>
			        <td></td>
			        <td>0.59</td>
			        <td> 0.43 </td>
		          </tr>
			      <tr>
			        <td>2013</td>
			        <td>0.9</td>
			        <td> 0.77 </td>
			        <td></td>
			        <td></td>
			        <td></td>
			        <td></td>
		          </tr>
		        </tbody>
		      </table>
		  </table-wrap>
		  	<table-wrap id="T4">
			<label>Table 4</label>
		<caption>
			<title>Summary of the estimates of parameters with the bootstrapped ML method from 1500 runs of bootstrap simulation for CPUE and catch data observed from 2003 to 2013 for <italic>O. bartramii</italic>. For each bootstrap run, mean square error (MSE) was calculated.</title>
		</caption>
		<table frame="hsides" rules="groups">
  <thead>
			      <tr>
			        <th>Models</th>
			        <th>Statistic</th>
			        <th> <italic>r</italic> </th>
			        <th> <italic>K</italic> </th>
			        <th> <italic>q</italic> </th>
			        <th>MSE</th>
			        <th>AIC</th>
		          </tr>
		        </thead>
			    <tbody>
			      <tr>
			        <td rowspan="5">SP</td>
			        <td>Median</td>
			        <td>0.455</td>
			        <td>106</td>
			        <td>0.03</td>
			        <td>0.45</td>
			        <td> 30.26 </td>
		          </tr>
			      <tr>
			        <td>Mean</td>
			        <td>0.665</td>
			        <td>116</td>
			        <td>0.04</td>
			        <td>0.53</td>
			        <td> 32.26 </td>
		          </tr>
			      <tr>
			        <td>CV</td>
			        <td>104%</td>
			        <td>45%</td>
			        <td>96%</td>
			        <td>35%</td>
			        <td> 33% </td>
		          </tr>
			      <tr>
			        <td> 5th% </td>
			        <td>0.22</td>
			        <td>42</td>
			        <td>0.01</td>
			        <td>0.38</td>
			        <td> 25.38 </td>
		          </tr>
			      <tr>
			        <td> 95th% </td>
			        <td>2.707</td>
			        <td>224</td>
			        <td>0.09</td>
			        <td>0.96</td>
			        <td> 38.74 </td>
		          </tr>
			      <tr>
			        <td rowspan="5">Ps-EDSP</td>
			        <td>Median</td>
			        <td>0.443</td>
			        <td>125</td>
			        <td>0.027</td>
			        <td>0.43</td>
			        <td> 25.32 </td>
		          </tr>
			      <tr>
			        <td>Mean</td>
			        <td>0.492</td>
			        <td>138</td>
			        <td>0.031</td>
			        <td>0.49</td>
			        <td> 27.47 </td>
		          </tr>
			      <tr>
			        <td>CV</td>
			        <td>52%</td>
			        <td>38%</td>
			        <td>64%</td>
			        <td>30%</td>
			        <td> 29% </td>
		          </tr>
			      <tr>
			        <td> 5th% </td>
			        <td>0.214</td>
			        <td>70</td>
			        <td>0.01</td>
			        <td>0.38</td>
			        <td> 23.12 </td>
		          </tr>
			      <tr>
			        <td> 95th% </td>
			        <td>0.882</td>
			        <td>247</td>
			        <td>0.069</td>
			        <td>0.90</td>
			        <td> 32.43% </td>
		          </tr>
			      <tr>
			        <td rowspan="5">Pf-EDSP</td>
			        <td>Median</td>
			        <td>0.56</td>
			        <td>108</td>
			        <td>0.03</td>
			        <td>0.45</td>
			        <td> 34.53 </td>
		          </tr>
			      <tr>
			        <td>Mean</td>
			        <td>0.624</td>
			        <td>122</td>
			        <td>0.036</td>
			        <td>0.51</td>
			        <td> 36.07 </td>
		          </tr>
			      <tr>
			        <td>CV</td>
			        <td>52%</td>
			        <td>45%</td>
			        <td>71%</td>
			        <td>33%</td>
			        <td> 31% </td>
		          </tr>
			      <tr>
			        <td> 5th% </td>
			        <td>0.23</td>
			        <td>54</td>
			        <td>0.008</td>
			        <td>0.39</td>
			        <td>29.86</td>
		          </tr>
			      <tr>
			        <td> 95th% </td>
			        <td>1.237</td>
			        <td>241</td>
			        <td>0.087</td>
			        <td>0.95</td>
			        <td> 39.45 </td>
		          </tr>
			      <tr>
			        <td rowspan="5">Ps-Pf-EDSP</td>
			        <td>Median</td>
			        <td>0.558</td>
			        <td>126</td>
			        <td>0.026</td>
			        <td>0.45</td>
			        <td> 34.47 </td>
		          </tr>
			      <tr>
			        <td>Mean</td>
			        <td>0.627</td>
			        <td>138</td>
			        <td>0.032</td>
			        <td>0.50</td>
			        <td> 36.04 </td>
		          </tr>
			      <tr>
			        <td>CV</td>
			        <td>56%</td>
			        <td>42%</td>
			        <td>68%</td>
			        <td>32%</td>
			        <td> 32% </td>
		          </tr>
			      <tr>
			        <td> 5th% </td>
			        <td>0.245</td>
			        <td>62</td>
			        <td>0.01</td>
			        <td>0.38</td>
			        <td> 29.38 </td>
		          </tr>
			      <tr>
			        <td> 95th% </td>
			        <td>1.226</td>
			        <td>261</td>
			        <td>0.076</td>
			        <td>0.93</td>
			        <td> 39.93 </td>
		          </tr>
		        </tbody>
		      </table>
		  </table-wrap>
		  			<fig id="F3">
				<label>Fig. 3</label>
				<caption>
				<title>Distribution of the parameters estimated with the bootstrapped ML in the Ps-EDSP model for <italic>O. bartramii</italic> from 2003 to 2013. The red lines are the mean value for each parameter and the dotted red lines are the 95% confidence intervals.</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig3_fmt.jpeg"/>
			</fig>

		  <p>For <italic>I. argentinus</italic>, the smallest MSE, CV and AIC were 1.08, 6% and 35.61, respectively, for the Ps-EDSP model, and Ps-EDSP was selected as the best model for <italic>I. argentinus</italic> (<xref ref-type="table" rid="T5">Table 5</xref>). Means of <italic>r</italic>, <italic>K</italic> and <italic>q</italic> estimated with the bootstrapped ML method were 0.374, 512×10<sup>4</sup> and 0.026×10<sup>–4</sup>, respectively (<xref ref-type="table" rid="T5">Table 5</xref>). The distribution of all three parameters were positively skewed (<xref ref-type="fig" rid="F4">Fig. 4</xref>). The estimated MSY ranged from 30×10<sup>4</sup> to 80×10<sup>4</sup>, with a mean value of 44×10<sup>4</sup> t (<xref ref-type="fig" rid="F4">Fig. 4</xref>). </p>
		  	<table-wrap id="T5">
			<label>Table 5</label>
		<caption>
			<title>Summary of the estimates of parameters with the bootstrapped ML method from 1500 runs of bootstrap simulation for CPUE and catch data observed from 2000 to 2010 for <italic>I. argentinus. </italic>For each bootstrap run, mean square error (MSE) was calculated.</title>
		</caption>
		<table frame="hsides" rules="groups">
  <thead>
		        <tr>
		          <th>Models</th>
		          <th>Statistic</th>
		          <th> <italic>r</italic> </th>
		          <th> <italic>K</italic> </th>
		          <th> <italic>q</italic> </th>
		          <th>MSE</th>
		          <th>AIC</th>
	            </tr>
	          </thead>
		      <tbody>
		        <tr>
		          <td rowspan="5">SP</td>
		          <td>Median</td>
		          <td>1.274</td>
		          <td>487</td>
		          <td>0.015</td>
		          <td>1.09</td>
		          <td>38.88</td>
	            </tr>
		        <tr>
		          <td>Mean</td>
		          <td>1.512</td>
		          <td>491</td>
		          <td>0.017</td>
		          <td>1.10</td>
		          <td>40.85</td>
	            </tr>
		        <tr>
		          <td>CV</td>
		          <td>75%</td>
		          <td>11%</td>
		          <td>38%</td>
		          <td>14%</td>
		          <td>14%</td>
	            </tr>
		        <tr>
		          <td> 5th% </td>
		          <td>0.188</td>
		          <td>407</td>
		          <td>0.012</td>
		          <td>0.89</td>
		          <td>35.87</td>
	            </tr>
		        <tr>
		          <td> 95th% </td>
		          <td>3.427</td>
		          <td>586</td>
		          <td>0.030</td>
		          <td>1.38</td>
		          <td>42.82</td>
	            </tr>
		        <tr>
		          <td rowspan="5">Ps-EDSP</td>
		          <td>Median</td>
		          <td>0.374</td>
		          <td>552</td>
		          <td>0.026</td>
		          <td>1.07</td>
		          <td> 33.56 </td>
	            </tr>
		        <tr>
		          <td>Mean</td>
		          <td>0.383</td>
		          <td>538</td>
		          <td>0.027</td>
		          <td>1.08</td>
		          <td> 35.61 </td>
	            </tr>
		        <tr>
		          <td>CV</td>
		          <td>23%</td>
		          <td>11%</td>
		          <td>26%</td>
		          <td>8%</td>
		          <td> 6% </td>
	            </tr>
		        <tr>
		          <td> 5th% </td>
		          <td>0.261</td>
		          <td>412</td>
		          <td>0.020</td>
		          <td>0.79</td>
		          <td> 30.38 </td>
	            </tr>
		        <tr>
		          <td> 95th% </td>
		          <td>0.533</td>
		          <td>591</td>
		          <td>0.040</td>
		          <td>1.32</td>
		          <td> 38.07 </td>
	            </tr>
		        <tr>
		          <td rowspan="5">Pf-EDSP</td>
		          <td>Median</td>
		          <td>2.052</td>
		          <td>320</td>
		          <td>0.023</td>
		          <td>1.14</td>
		          <td> 38.46 </td>
	            </tr>
		        <tr>
		          <td>Mean</td>
		          <td>2.049</td>
		          <td>318</td>
		          <td>0.026</td>
		          <td>1.15</td>
		          <td> 40.53 </td>
	            </tr>
		        <tr>
		          <td>CV</td>
		          <td>62%</td>
		          <td>31%</td>
		          <td>47%</td>
		          <td>13%</td>
		          <td> 13% </td>
	            </tr>
		        <tr>
		          <td> 5th% </td>
		          <td>0.276</td>
		          <td>140</td>
		          <td>0.014</td>
		          <td>0.91</td>
		          <td> 34.11 </td>
	            </tr>
		        <tr>
		          <td> 95th% </td>
		          <td>4.027</td>
		          <td>473</td>
		          <td>0.526</td>
		          <td>1.42</td>
		          <td> 43.19 </td>
	            </tr>
		        <tr>
		          <td rowspan="5">Ps-Pf-EDSP</td>
		          <td>Median</td>
		          <td>0.47</td>
		          <td>438</td>
		          <td>0.033</td>
		          <td>1.35</td>
		          <td> 37.52 </td>
	            </tr>
		        <tr>
		          <td>Mean</td>
		          <td>0.465</td>
		          <td>425</td>
		          <td>0.034</td>
		          <td>1.36</td>
		          <td> 39.59 </td>
	            </tr>
		        <tr>
		          <td>CV</td>
		          <td>26%</td>
		          <td>15%</td>
		          <td>30%</td>
		          <td>8%</td>
		          <td> 8% </td>
	            </tr>
		        <tr>
		          <td> 5th% </td>
		          <td>0.33</td>
		          <td>319</td>
		          <td>0.025</td>
		          <td>1.22</td>
		          <td> 33.22 </td>
	            </tr>
		        <tr>
		          <td> 95th% </td>
		          <td>0.663</td>
		          <td>493</td>
		          <td>0.052</td>
		          <td>1.55</td>
		          <td> 41.53 </td>
	            </tr>
	          </tbody>
	        </table>
	      </table-wrap>
		  			<fig id="F4">
				<label>Fig. 4</label>
				<caption>
				<title>Distribution of the parameters estimated with the bootstrapped ML in the Ps-EDSP model for the <italic>I. argentnius</italic> from 2003 to 2013. The red lines are the mean value for each parameter and the dotted red lines are the 95% confidence intervals.</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig4_fmt.jpeg"/>
			</fig>

<p>For <italic>D. gigas</italic>, the smallest MSE, CV and AIC were 0.82, 11% and 33.17, respectively, for the Pf-EDSP model and the Pf-EDSP was identified as the best model for <italic>D. gigas </italic>(<xref ref-type="table" rid="T6">Table 6</xref>). Means <italic>r</italic>, <italic>K</italic> and <italic>q</italic> estimated with the bootstrapped ML method were 1.72, 270×10<sup>4</sup> t and 0.027×10<sup>–4</sup>, respectively. The estimated MSY ranged from 100×10<sup>4</sup> to 340×10<sup>4</sup>, with a mean value of 119×10<sup>4</sup> t (<xref ref-type="fig" rid="F5">Fig. 5</xref>).</p>
	<table-wrap id="T6">
			<label>Table 6</label>
		<caption>
			<title>Summary of the estimates of parameters with the bootstrapped ML method from 1500 runs of bootstrap simulation for CPUE and catch data observed from 2003 to 2012 for <italic>D. gigas</italic>. For each bootstrap run, mean square error (MSE) was calculated.</title>
		</caption>
		<table frame="hsides" rules="groups">
  <thead>
      <tr>
        <th>Models</th>
        <th> Statistic </th>
        <th><italic>r</italic></th>
        <th><italic>K</italic></th>
        <th><italic>q</italic></th>
        <th>MSE</th>
        <th>AIC</th>
      </tr>
    </thead>
    <tbody>
      <tr>
        <td rowspan="5">SP</td>
        <td>Median</td>
        <td>1.538</td>
        <td>214</td>
        <td>0.034</td>
        <td>0.96</td>
        <td>33.67</td>
      </tr>
      <tr>
        <td>Mean</td>
        <td>1.447</td>
        <td>255</td>
        <td>0.034</td>
        <td>0.98</td>
        <td>35.99</td>
      </tr>
      <tr>
        <td>CV</td>
        <td>29%</td>
        <td>49%</td>
        <td>37%</td>
        <td>11%</td>
        <td>11%</td>
      </tr>
      <tr>
        <td> 5th% </td>
        <td>0.616</td>
        <td>149</td>
        <td>0.014</td>
        <td>0.85</td>
        <td>30.59</td>
      </tr>
      <tr>
        <td> 95th% </td>
        <td>1.989</td>
        <td>502</td>
        <td>0.056</td>
        <td>1.19</td>
        <td>39.07</td>
      </tr>
      <tr>
        <td rowspan="5">Ps-EDSP</td>
        <td>Median</td>
        <td>0.82</td>
        <td>497</td>
        <td>0.032</td>
        <td>1.03</td>
        <td> 35.48 </td>
      </tr>
      <tr>
        <td>Mean</td>
        <td>0.851</td>
        <td>534</td>
        <td>0.033</td>
        <td>1.07</td>
        <td> 37.77 </td>
      </tr>
      <tr>
        <td>CV</td>
        <td>35%</td>
        <td>35%</td>
        <td>46%</td>
        <td>11%</td>
        <td> 11% </td>
      </tr>
      <tr>
        <td> 5th% </td>
        <td>0.417</td>
        <td>282</td>
        <td>0.012</td>
        <td>0.93</td>
        <td> 29.31 </td>
      </tr>
      <tr>
        <td> 95th% </td>
        <td>1.372</td>
        <td>898</td>
        <td>0.062</td>
        <td>1.33</td>
        <td>39.23</td>
      </tr>
      <tr>
        <td rowspan="5">Pf-EDSP</td>
        <td>Median</td>
        <td>1.72</td>
        <td>270</td>
        <td>0.027</td>
        <td>0.80</td>
        <td> 30.96 </td>
      </tr>
      <tr>
        <td>Mean</td>
        <td>1.7</td>
        <td>300</td>
        <td>0.027</td>
        <td>0.82</td>
        <td> 33.17 </td>
      </tr>
      <tr>
        <td>CV</td>
        <td>31%</td>
        <td>35%</td>
        <td>27%</td>
        <td>10%</td>
        <td> 11% </td>
      </tr>
      <tr>
        <td> 5th% </td>
        <td>0.781</td>
        <td>197</td>
        <td>0.015</td>
        <td>0.70</td>
        <td> 27.99 </td>
      </tr>
      <tr>
        <td> 95th% </td>
        <td>2.569</td>
        <td>506</td>
        <td>0.04</td>
        <td>0.98</td>
        <td> 35.99 </td>
      </tr>
      <tr>
        <td rowspan="5">Ps-Pf-EDSP</td>
        <td>Median</td>
        <td>1.307</td>
        <td>472</td>
        <td>0.024</td>
        <td>0.96</td>
        <td> 32.54 </td>
      </tr>
      <tr>
        <td>Mean</td>
        <td>1.307</td>
        <td>515</td>
        <td>0.024</td>
        <td>1.00</td>
        <td> 33.97 </td>
      </tr>
      <tr>
        <td>CV</td>
        <td>34%</td>
        <td>33%</td>
        <td>37%</td>
        <td>12%</td>
        <td> 12% </td>
      </tr>
      <tr>
        <td> 5th% </td>
        <td>0.585</td>
        <td> 302 </td>
        <td>0.01</td>
        <td>0.86</td>
        <td> 30.62 </td>
      </tr>
      <tr>
        <td> 95th% </td>
        <td>2.071</td>
        <td>876</td>
        <td>0.04</td>
        <td>1.27</td>
        <td> 39.38 </td>
      </tr>
    </tbody>
  </table>
</table-wrap>
			<fig id="F5">
				<label>Fig. 5</label>
				<caption>
				<title>Distribution of the parameters estimated with the bootstrapped ML in the Pf-EDSP model for the <italic>D. gigas</italic> from 2003 to 2013. The red lines are the mean value for each parameter and the dotted red lines are the 95% confidence intervals.</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig5_fmt.jpeg"/>
			</fig>

<p>The management reference points for ommastrephid squids using the original surplus production model and its optimal EDSP model were plotted in <xref ref-type="fig" rid="F6">Figures 6</xref>, <xref ref-type="fig" rid="F7">7</xref> and <xref ref-type="fig" rid="F8">8</xref>. For <italic>O. bartramii</italic>, the peak annual catch, (14×10<sup>4 </sup>t in 2007) was near MSY, and all other annual catches were less than MSY. The fishing mortality rates from 2003 to 2013 were less than F<sub>0.1 </sub>(=0.22) except in 2007 and 2008. The biomasses from 2003 to 2013 were higher than B<sub>MSY</sub> (<xref ref-type="fig" rid="F6">Fig. 6</xref>).</p>
			<fig id="F6">
				<label>Fig. 6</label>
				<caption>
				<title>Development of the <italic>O. bartramii</italic> fishery from 2003 to 2013. A, based on the PS model; B, based on the Ps-EDSP model. Triangle represents the biomass status of the first year (2003) of study; square represents the biomass status of the last year (2013).</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig6_fmt.jpeg"/>
			</fig>

<p>For <italic>I. argentinus</italic>, the peak annual catch (54×10<sup>4</sup> t in 2007) was more than MSY, and other annual catches were all less than MSY. The fishing mortality rates from 2000 to 2010 were less than F<sub>0.1 </sub>(=0.17) except in 2007 for the Ps-EDSP model. The biomasses during these years was higher than B<sub>MSY</sub> (<xref ref-type="fig" rid="F7">Fig. 7</xref>).</p>
			<fig id="F7">
				<label>Fig. 7</label>
				<caption>
				<title>Development of the <italic>I. argentinus</italic> fishery from 2000 to 2010. A, based on the PS model; B, based on the Ps-EDSP model. Triangle represents the biomass status of the first year (2000) of study; square represents the biomass status of the last year (2010).</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig7_fmt.jpeg"/>
			</fig>

<p>For <italic>D. gigas</italic>, the peak annual catch (92×10<sup>4</sup> t in 2012) was less than MSY. The fishing mortality rates from 2003 to 2012 were less than F<sub>0.1</sub> (=0.77), except in 2012 for the Pf-EDSP model. The biomasses during the modelled period were higher than B<sub>MSY</sub> (<xref ref-type="fig" rid="F8">Fig. 8</xref>).</p>
			<fig id="F8">
				<label>Fig. 8</label>
				<caption>
				<title>Development of the <italic>D. gigas</italic> fishery from 2003 to 2012. A, based on the PS model; B, based on the Pf-EDSP model. Triangle represents the biomass status of the first year (2003) of study; square represents the biomass status of the last year (2012).</title>
				</caption>
				<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="../sm81n1-4497-web-resources/image/sm4497fig8_fmt.jpeg"/>
			</fig>

<p>Overall, the assessment results for each species based on the original and its optimal surplus production models show that the fisheries of ommastrephid squid (<italic>O. bartramii, I. argentinus</italic> and <italic>D. gigas</italic>) are currently in good condition as their biomasses are all above their corresponding B<sub>MSY</sub> values.</p>
			
		</sec></sec>
<sec id="S4">
<title>DISCUSSION</title>
			
			<p>Many studies indicated that variability in marine ecosystems, especially SST, causes inter-annual variability in the ommastrephid squid stocks (<xref ref-type="bibr" rid="CIT33">Waluda et al. 1999</xref>, <xref ref-type="bibr" rid="CIT36">2006</xref>, <xref ref-type="bibr" rid="CIT12">Chen et al. 2007</xref>), but the inter-annual variability cannot be controlled and predicted effectively. Thus, assessment of ommastrephid squid stocks by incorporating environmental factors is difficult to implement. To our knowledge, there is only one study about assessing the western winter-spring cohort of neon flying squid with Bayesian inferences using SST on spawning ground and feeding ground based on surplus production model, and the model with spawning ground SST was the optimal model (<xref ref-type="bibr" rid="CIT38">Wang et al. 2015</xref>). </p>
			<p>The longevity of ommastrephid squids is roughly one year, so the stock of a given year is comprised almost entirely of new recruits (<xref ref-type="bibr" rid="CIT28">Rosenberg et al. 1990</xref>, <xref ref-type="bibr" rid="CIT26">Pierce and Guerra 1994</xref>). It is therefore essential to allow the suitable spawning habitat (for spawners to spawn and the larvae to survive) to ensure a high probability of successful recruitment in the following year. Furthermore, ommastrephid squids are fast-growing species (<xref ref-type="bibr" rid="CIT07">Boyle and Rodhouse 2005</xref>) and a suitable feeding habitat is vital for their growth in stock biomass. Thus, how to measure the habitat of the spawning and feeding grounds when assessing ommastrephid stocks is very important. </p>
		  <p>This study incorporates the environmental indices (<italic>Ps</italic> and <italic>Pf</italic>) to reflect inter-annual variability in environmental conditions of spawning grounds and feeding grounds. On spawning grounds, climate changes and some large-scale or mesoscale oceanographic processes may drive the inter-annual variability of <italic>Ps</italic>, which can influence the recruitment of ommastrephid squids. For example, ENSO events and the strength of the North Equatorial Current and the Kuroshio Current change Ps to influence <italic>O. bartramii</italic> recruitment in the northwest Pacific (<xref ref-type="bibr" rid="CIT12">Chen et al. 2007</xref>). The relative strength of the Brazil current and the Falkland current may influence the Ps to affect the recruitment of <italic>I. argentinus</italic> in the southwest Atlantic (<xref ref-type="bibr" rid="CIT33">Waluda et al. 1999</xref>). ENSO events also strongly influence <italic>D. gigas</italic> recruitment, as weak upwelling during strong El Niño years lead to very low catches in the southeast Pacific (<xref ref-type="bibr" rid="CIT32">Waluda and Rodhouse 2006</xref>). On feeding grounds, ommastrephid squids are mainly distributed in waters with a suitable SST (<xref ref-type="bibr" rid="CIT12">Chen et al. 2007</xref>), which are mainly located in transition areas, including meandering eddies, frontal zones and so on, yielding highly productive habitats that serve as feeding grounds for ommastrephid squids (<xref ref-type="bibr" rid="CIT41">Zainuddin et al. 2006</xref>). The best surplus production models for the three-ommastrephid stocks (the surplus production model with <italic>Ps</italic> for <italic>O. bartramii</italic> and <italic>I. argentinus</italic>, the surplus production model with <italic>Pf</italic> for <italic>D. gigas</italic>) are all models incorporating environmental factors. This is consistent with our hypothesis that considering environmental variability can improve the assessment of ommastrephid squids.</p>
			<p>For each modelled ommastrephid stock, the original surplus production model and corresponding best model showed differences in the exploitation status. The <italic>O. bartramii</italic> fisheries arenot overfished, which was consistent with previous results (<xref ref-type="bibr" rid="CIT13">Chen et al. 2008a</xref>, <xref ref-type="bibr" rid="CIT38">Wang et al. 2015</xref>). Parameters <italic>r</italic>, <italic>K</italic> and <italic>q</italic> based on SP and Ps-EDSP showed little difference, but <italic>K</italic> in SP model was about 10% less than that in Ps-EDSP model (<xref ref-type="table" rid="T4">Table 4</xref>). The status for each year based on Ps-EDSP model was closer to the limit (F/F<sub>MSY</sub>) than any other based on the SP model (<xref ref-type="fig" rid="F6">Fig. 6</xref>). This finding was similar to the results obtained by different methods modelled by Bayesian inferences (<xref ref-type="bibr" rid="CIT38">Wang et al. 2015</xref>).</p>
			<p>For the <italic>I. argentinus</italic> fishery, status for almost the whole year in the target zone was in a good state. The MSY was about 44×10<sup>4</sup> t and the results were consistent with <xref ref-type="bibr" rid="CIT21">Lu et al. (2013b)</xref>. However, the status of all years based on the SP model was much tight and no differences were found between them relative to the status of all years based on the Ps-EDSP model (<xref ref-type="fig" rid="F7">Fig. 7</xref>). Parameter <italic>r</italic> in the SP model was about four times that in the Ps-EDSP model, and <italic>K</italic> in the SP model was about 12% less than that in Ps-EDSP model (<xref ref-type="table" rid="T5">Table 5</xref>).</p>
			<p>For the <italic>D. gigas</italic> fishery, the development status in the SP and the Pf-EDSP model was similar (<xref ref-type="fig" rid="F8">Fig. 8</xref>), but parameters <italic>r</italic> and <italic>K</italic> were about 19 and 26% less than any other one in the Pf-EDSP model, respectively (<xref ref-type="table" rid="T6">Table 6</xref>).</p>
			<p>The improvements in the results through incorporation of environmental factors benefit the assessment and management of ommastrephid squid stocks. For example, one benefit is another method of assessing ommastrephid squid stocks. Because assessment of fished cephalopod stocks is a relatively undeveloped field, only a few methods are currently used, such as fishing and acoustic surveys, egg and larval production estimates, mark-recapture, the Leslie-Delury method and the surplus production model (<xref ref-type="bibr" rid="CIT07">Boyle and Rodhouse 2005</xref>, <xref ref-type="bibr" rid="CIT38">Wang et al. 2015</xref>); even fewer of those methods incorporate environmental variables. The other benefit of incorporating environmental factors into management procedures could be the potential increase in fishing effort when future recruitment is expected to be stable or increasing, and the reduction in fishing effort when future recruitment is expected to be poor (<xref ref-type="bibr" rid="CIT03">Basson 1999</xref>). With the effective forecasting of environmental conditions, the surplus production models developed will allow precautionary approaches for the management of ommastrephid squid fisheries.</p>
			<p>The dynamic life history of ommastrephid squids poses challenges for the assessment of stocks. This study shows that considering environmental factors can improve their assessment. Because of the importance of thermal habitat in regulating the dynamics of ommastrephid squids, we suggest that environmental factors such as SST should be considered in the assessment of ommastrephid squid stocks.</p>
			
			</sec>
			</body>
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